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  • yTree
    This is a draft phylogenetic tree for the R-P312 Y-DNA haplogroup The data for this tree come from NGS sources including the BigY test at FamilyTreeDNA, the various tests at FullGenomes as well as the 1000 Genomes project These are discovery tests They sequence the DNA to reveal novel SNPs and INDELs which mark new branches of the tree If you wish to be included in this project, you must
  • Big Tree: Mutations
    For the most part, only mutations which are assumed to be shared by two or more men are included Those variants unique to an individual man are not included This list includes SNPs, short INDELs, as well as longer INDELs which could be described as STRs If there is a "Y" in the column labelled "Unc", that indicates that the mutation does not show up well in all VCF files and so the position
  • The Big Tree: R-FGC5939
    SNP names which are bold grey indicates that their exact position on the tree is uncertain This SNP may belong further upstream or all downstream branches may not be positive for it This is often the case for SNPs found in FGC kits or 1kG kits in regions not covered by BigY tests
  • Big Tree: To Do List
    The table below summarizes the status of the kits that are yet to be analyzed On average, I can work through about 20-30 kits per week
  • Big Tree: Instructions
    The Big Tree project is open to all men who wish to contribute their NGS results It's free This project is one of many that relies on the open sharing of BigY, FGC, or other results These tests are useful only when the data is compared to those of other men Due to the recent shutdown of the ydna data warehouse in May, 2025, you must contact me directly at (scotsgenealogy at gmail com) to
  • The Big Tree: R-Z39300
    SNP names which are bold grey indicates that their exact position on the tree is uncertain This SNP may belong further upstream or all downstream branches may not be positive for it This is often the case for SNPs found in FGC kits or 1kG kits in regions not covered by BigY tests
  • The Big Tree - ytree. net
    SNP names which are bold grey indicates that their exact position on the tree is uncertain This SNP may belong further upstream or all downstream branches may not be positive for it This is often the case for SNPs found in FGC kits or 1kG kits in regions not covered by BigY tests
  • Block Information - ytree. net
    The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin, The Russian Journal of Genetic Genealogy (Русская версия), Vol 6, No 2 (2014) Vol 7, No 1 (2015) The
  • Big Tree: List of Reference Sequence STRs - ytree. net
    This is a list of STRs and homopolymers in the b37 Y-chromosome reference sequence It includes all the STRs whose motif length is at most 7 bases and whose repeat counts also have a minimum value as follows:
  • The Big Tree: R-S16264
    SNP names which are bold grey indicates that their exact position on the tree is uncertain This SNP may belong further upstream or all downstream branches may not be positive for it This is often the case for SNPs found in FGC kits or 1kG kits in regions not covered by BigY tests





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