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  • The IMOD Home Page - University of Colorado Boulder
    IMOD Guides, Assistance and Information The IMOD User's Guide with installation and other general information Tomography Resources A Tomography Guide, with detailed instructions on building tomograms with the IMOD package A Tutorial for building a dual-axis tomogram with Etomo, and a sample data set
  • IMOD Download Page - University of Colorado Boulder
    In OS 12 3 and onward, Python must be installed on the system to install and use IMOD Efficient options are to use this Python 3 10 7 universal installer package that runs on Intel and M1 processors, or to install in homebrew, if you are already using homebrew for other packages
  • IMOD Tomography Guide - University of Colorado Boulder
    IMOD 4 11 provides new flexibility with regard to the parameters of a tilt series Originally, the algorithm and parameters in Beadtrack were tuned to operate well over a certain range of bead sizes and with tilt intervals of about 2 or less
  • IMOD Users Guide for Version 5. 1 - University of Colorado Boulder
    See the IMOD model file format ASCII and binary specifications if you wish to write your own conversion program The IMOD model format can be either binary or ASCII The main use of the ASCII format would be to access the data for analysis or conversion by other programs
  • Download Older IMOD for Microsoft Windows - University of Colorado Boulder
    Download Older IMOD for Microsoft Windows See the IMOD Home Page for a list of requirements For instructions on unpacking, see the latest IMOD User's Guide
  • Etomo Tutorial for IMOD Version 5. 1 - University of Colorado Boulder
    If you do not have IMOD 5 1 installed, you should either upgrade to it, or enter imodhelp in the terminal and select the Etomo Tutorial that comes in your installed version To get started, download the 1K sample data set from our web site
  • point2model - University of Colorado Boulder
    point2model(1) General Commands Manual point2model(1) NAME point2model - Convert point listing to IMOD model file SYNOPSIS point2model [options] point_file model_file DESCRIPTION Point2model will convert a text file with a simple list of 3D point coordinates, one per line, to an IMOD model The file can be in one of four forms: each line
  • The IMOD Home Page - University of Colorado Boulder
    IMOD Guides, Assistance and Information The IMOD User's Guide with installation and other general information Tomography Resources A Tomography Guide, with detailed instructions on building tomograms with the IMOD package A Tutorial for building a dual-axis tomogram with Etomo, and a sample data set This tutorial now uses the unbinned
  • Changes for IMOD 5. 1 - bio3d. colorado. edu
    11 20 23: In Etomo - Settings, fixed the local parallel processing panel so it displays the correct information when cpu adoc or the IMOD_PROCESSORS environment variable is in use Also made it possible to add GPU processing when IMOD_PROCESSORS is in use
  • Program Descriptions for IMOD - University of Colorado Boulder
    etomo: Interface for building single- and dual-axis tomograms with IMOD, processing multiple tilt series in batch mode, joining tomograms from serial sections, filtering with nonlinear anisotropic diffusion, or aligning and averaging subvolumes from tomograms with our PEET package





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